macOS
Homebrew已验证 · 100%
brew install mrbayeslocal Homebrew formula metadata
安装
其他安装命令
Linux
Debian apt已验证 · 92%
sudo apt install mrbayesDebian stable package indexes · mrbayes · 来源: deb.debian.org
Nix已验证 · 92%
nix profile install nixpkgs#mrbayesnixpkgs package indexes · pkgs/by-name/mr/mrbayes/package.nix · 来源: api.github.com
Windows
Windows Package Manager已验证 · 92%
winget install --id NBIS.MrBayes -eWindows Package Manager source index · NBIS.MrBayes · 来源: cdn.winget.microsoft.com
概览
软件包摘要
Bayesian inference of phylogenies and evolutionary models
历史
项目历史与用法
MrBayes is a phylogenetics program for Bayesian inference and model choice across evolutionary models. John P. Huelsenbeck and Fredrik Ronquist introduced MRBAYES in Bioinformatics in 2001 as software for Bayesian inference of phylogeny using a variant of Markov chain Monte Carlo. The project later became associated with MrBayes 3, cited for Bayesian phylogenetic inference under mixed models, and MrBayes 3.2, cited for efficient inference and model selection across a large model space.
项目历史
The program's technical role is to make Bayesian phylogenetic analysis accessible through a command-line tool named mb. The official site lists support for nucleotide, amino-acid, restriction-site, and morphological data; mixed data types in one analysis; partitioned models with linked or unlinked parameters; many nucleotide and amino-acid rate matrices; clock trees; topology constraints; convergence diagnostics; stepping-stone model-likelihood estimation; MPI parallel jobs; BEAGLE acceleration; and checkpointing.
使用方式
MrBayes is a research package more than a general developer tool. Its manual says new users are served by a manual with tutorials, model discussions, FAQ material, and differences between versions 2 and 3, while published analyses are expected to cite the relevant MrBayes papers and optional parallel or BEAGLE-method papers. The GitHub repository notes that after release 3.2.6 in November 2015 the project entered maintenance mode under the National Bioinformatics Infrastructure Sweden, with the original development team still involved and future work oriented mainly toward bug fixes. Package managers expose it as a command-line scientific application for reproducible phylogenetic workflows.
来源
安全态势
风险级别：绿色
narrow executable package without higher-risk signals.
风险分类器
绿色 风险 · 低 置信度 · appliance
原因
- narrow executable package without higher-risk signals
信号
- metadata:no-higher-risk-signals
安装行为
- formula 元数据中未记录 Homebrew post-install 钩子。
- Homebrew bottle 元数据适用于 6 个平台目标。
- 安装时包含 2 个运行时依赖。
- 构建元数据列出 1 个构建依赖。
建议审查
在无人值守的代理使用前，请检查该工具是否读取明文凭据、写入远程状态、发布制品或调用插件。
可执行文件
已安装的可执行文件
| 命令 | 类型 | 暴露范围 | 备注 |
|---|---|---|---|
mb | cli | 全局可执行文件 |
新鲜度
版本和新鲜度
这些信号区分页生成时间、软件包管理器活动和上游发布比较。只有存在证据 URL 和可比较版本时，才会提示版本落后。
页面生成时间2026-07-08
管理器版本3.2.7a
管理器更新时间
本地数据OK
上游not checked
检测到的最新版本未检测到
https://github.com/NBISweden/MrBayes
- 信息No package-manager update timestamp was available.低 置信度
- 信息No cached GitHub release or tag data was available.https://github.com/NBISweden/MrBayesnone 置信度
安装元数据
软件包元数据
| 软件包键 | brew:mrbayes |
|---|---|
| 版本 | 3.2.7a |
| 软件包管理器 | Homebrew |
| 软件包管理器页面 | https://formulae.brew.sh/formula/mrbayes |
| 主页 | https://nbisweden.github.io/MrBayes/ |
| 仓库 | https://github.com/NBISweden/MrBayes |
| 上游文档 | https://nbisweden.github.io/MrBayes/manual.html |
| 许可证 | GPL-3.0-or-later |
| 源码归档 | https://github.com/NBISweden/MrBayes/archive/refs/tags/v3.2.7a.tar.gz |
| 依赖 | beagle, open-mpi |
| 构建依赖 | pkgconf |
| Bottle | 可用 (于 arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux) |
| Homebrew post-install | 未定义 |
| 服务 | 未声明 |
注册表事实
源数据库详情
| Source Database | Homebrew formula API |
|---|---|
| Tap | homebrew/core |
| Full Name | mrbayes |
| Version Scheme | 0 |
| Revision | 0 |
| Head Version | HEAD |
| Bottle Stable Root URL | https://ghcr.io/v2/homebrew/core |
| Deprecated | no |
| Disabled | no |
| Keg Only | no |
| URL Keys |
|
源数据库匹配
其他软件包管理器记录
匹配项来自外部软件包管理器索引，并与本地 Automic Vault 软件包链接分开显示。
Debian apt95%
mrbayes 3.2.7a-7+b1
Bayesian Inference of Phylogeny
sudo apt install mrbayes- Section: science
- Architecture: amd64
- Source Package: mrbayes
- 3 依赖
- 1 可选依赖
- normalized package name match
- 匹配方式：Mrbayes
Debian apt95%
mrbayes-doc 3.2.7a-7
Bayesian Inference of Phylogeny - manual
sudo apt install mrbayes-doc- Section: doc
- Architecture: all
- Source Package: mrbayes
- normalized package name match
- 匹配方式：Mrbayes
Debian apt95%
mrbayes-mpi 3.2.7a-7+b1
Bayesian Inference of Phylogeny - mpi version
sudo apt install mrbayes-mpi- Section: science
- Architecture: amd64
- Source Package: mrbayes
- 5 依赖
- 2 可选依赖
- normalized package name match
- 匹配方式：Mrbayes
Nix95%
mrbayes
nix profile install nixpkgs#mrbayes- normalized package name match
- 匹配方式：Mrbayes
Ubuntu apt95%
mrbayes 3.2.7a-7build2
Bayesian Inference of Phylogeny
sudo apt install mrbayes- Section: universe/math
- Architecture: amd64
- 3 依赖
- 1 可选依赖
- normalized package name match
- 匹配方式：Mrbayes
Ubuntu apt95%
mrbayes-doc 3.2.7a-7build2
Bayesian Inference of Phylogeny - manual
sudo apt install mrbayes-doc- Section: universe/doc
- Architecture: all
- Source Package: mrbayes
- normalized package name match
- 匹配方式：Mrbayes
Ubuntu apt95%
mrbayes-mpi 3.2.7a-7build2
Bayesian Inference of Phylogeny - mpi version
sudo apt install mrbayes-mpi- Section: universe/science
- Architecture: amd64
- Source Package: mrbayes
- 5 依赖
- 2 可选依赖
- normalized package name match
- 匹配方式：Mrbayes
winget95%
NBIS.MrBayes
winget install --id NBIS.MrBayes -e- normalized package name match
- 匹配方式：Mrbayes
来源线索
由仓库数据生成
此页面由 av-web 从 scripts/generate-pkg-sqlite.py 生成的私有软件包 SQLite 工件提供。
Combined YAML source
View the package source record on GitHub.
使用的来源
- Geiger risk classifier
- Nucleus package database
- av.db category and tag curation
- cross-ecosystem install command graph
- curated package history
- external package-manager database matches
- package relationship graph
- package version freshness
- package-page enrichment