# seqkit を Homebrew, apt, Nix でインストール

seqkit のインストール経路、実行ファイル、メタデータ、AI エージェント向けセキュリティノートを確認します。

## インストール

```sh
sudo av install brew:seqkit
```

追加のインストールコマンド:

### macOS

- Homebrew (100%):

```sh
brew install seqkit
```

  証拠: local Homebrew formula metadata

### Linux

- Debian apt (92%):

```sh
sudo apt install seqkit
```

  証拠: Debian stable package indexes: seqkit from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz

- Nix (92%):

```sh
nix profile install nixpkgs#seqkit
```

  証拠: nixpkgs package indexes: pkgs/by-name/se/seqkit/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1

## パッケージ情報

- **パッケージキー:** brew:seqkit
- **パッケージマネージャ:** Homebrew
- **パッケージマネージャページ:** <https://formulae.brew.sh/formula/seqkit>
- **バージョン:** 2.13.0
- **ソース概要:** Cross-platform and ultrafast toolkit for FASTA/Q file manipulation in Golang
- **ホームページ:** <https://bioinf.shenwei.me/seqkit>
- **リポジトリ:** <https://github.com/shenwei356/seqkit>
- **上流ドキュメント:** <https://bioinf.shenwei.me/seqkit>
- **ライセンス:** MIT
- **ソースアーカイブ:** <https://github.com/shenwei356/seqkit/archive/refs/tags/v2.13.0.tar.gz>
- **生成日時:** 2026-07-08T18:08:21+00:00

## 実行可能ファイル

- seqkit (cli)
- seqkit (エイリアス)

## ビルド依存関係

- go

## インストール挙動

- post-install フック: 未定義
- Bottle: 利用可能 対象 arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux

## バージョンと鮮度

- ページ生成日: 2026-07-08
- マネージャ版: 2.13.0
- ローカルデータ: OK
- 上流リポジトリ: https://github.com/shenwei356/seqkit
- 検出された最新: v2.13.0 (最新)
- 情報: No package-manager update timestamp was available.

## セキュリティノート

narrow executable package without higher-risk signals.

- **Geiger リスク:** グリーン / 低
- narrow executable package without higher-risk signals

## ソースデータベース詳細

- **Source Database:** Homebrew formula API
- **Tap:** homebrew/core
- **Full Name:** seqkit
- **Version Scheme:** 0
- **Revision:** 0
- **Head Version:** HEAD
- **Bottle Stable Root URL:** <https://ghcr.io/v2/homebrew/core>
- **Deprecated:** no
- **Disabled:** no
- **Keg Only:** no
- **URL Keys:** head, stable

## 他のパッケージマネージャ記録

- Debian apt - seqkit - 2.9.0+ds-1+b4: normalized package name match | Debian stable package indexes: seqkit from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | cross-platform and ultrafast toolkit for FASTA/Q file manipulation | https://github.com/shenwei356/seqkit
- Debian apt - seqkit-examples - 2.9.0+ds-1: normalized package name match | Debian stable package indexes: seqkit-examples from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | examples for seqkit: toolkit for FASTA/Q file manipulation | https://github.com/shenwei356/seqkit
- Nix - seqkit: normalized package name match | nixpkgs package indexes: pkgs/by-name/se/seqkit/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1
- Ubuntu apt - seqkit - 2.3.1+ds-2: normalized package name match | Ubuntu 24.04 LTS package indexes: seqkit from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | cross-platform and ultrafast toolkit for FASTA/Q file manipulation | https://github.com/shenwei356/seqkit
- Ubuntu apt - seqkit-examples - 2.3.1+ds-2: normalized package name match | Ubuntu 24.04 LTS package indexes: seqkit-examples from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | examples for seqkit: toolkit for FASTA/Q file manipulation | https://github.com/shenwei356/seqkit


## 関連リンク

- [Terminal utility packages](https://www.automicvault.com/ja/pkg/terminal-utilities/) - Matched terminal and command-line workflow metadata.
- [Networking and protocol packages](https://www.automicvault.com/ja/pkg/networking-protocol-tools/) - Matched network, protocol, or remote-service metadata.
- [Scientific computing packages](https://www.automicvault.com/ja/pkg/scientific-computing-tools/) - Matched scientific computing metadata.
- [Homebrew utility packages](https://www.automicvault.com/ja/pkg/brew-utility-packages/) - Matched Homebrew package provider.
- [go](https://www.automicvault.com/ja/pkg/brew/go/) - Build dependency declared by Homebrew.
- [seqtk](https://www.automicvault.com/ja/pkg/brew/seqtk/) - Shares av.db curated category or tags: bioinformatics, cli, fasta, fastq, science.
- [hmmer](https://www.automicvault.com/ja/pkg/brew/hmmer/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-analysis.
- [mmseqs2](https://www.automicvault.com/ja/pkg/brew/mmseqs2/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-analysis.
- [any2fasta](https://www.automicvault.com/ja/pkg/brew/any2fasta/) - Shares av.db curated category or tags: bioinformatics, cli, fasta, science.
- [fastp](https://www.automicvault.com/ja/pkg/brew/fastp/) - Shares av.db curated category or tags: bioinformatics, cli, fastq, science.
- [fastq-tools](https://www.automicvault.com/ja/pkg/brew/fastq-tools/) - Shares av.db curated category or tags: bioinformatics, cli, fastq, science.
- [fastqc](https://www.automicvault.com/ja/pkg/brew/fastqc/) - Shares av.db curated category or tags: bioinformatics, cli, fastq, science.
- [gffread](https://www.automicvault.com/ja/pkg/brew/gffread/) - Shares av.db curated category or tags: bioinformatics, cli, fasta, science.

## Combined YAML source

View the package source record on GitHub. [combined/seqkit.yml](https://github.com/automic-vault/db/blob/main/combined/seqkit.yml)


## ソース

- Nucleus package database
- Geiger risk classifier
- package-page enrichment
- package version freshness
- av.db category and tag curation
- package relationship graph
- external package-manager database matches
- cross-ecosystem install command graph