# Install snakemake Pythonic workflow system. Version 9.22.0 via Homebrew; verified 2026-06-02. ## Install ```sh sudo av install brew:snakemake ``` Additional install commands: ### macOS - Homebrew (100%): ```sh brew install snakemake ``` Evidence: local Homebrew formula metadata ### Linux - Debian apt (92%): ```sh sudo apt install snakemake ``` Evidence: Debian stable package indexes: snakemake from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz - dnf (92%): ```sh sudo dnf install snakemake ``` Evidence: Fedora Rawhide package metadata: snakemake from https://dl.fedoraproject.org/pub/fedora/linux/development/rawhide/Everything/x86_64/os/repodata/13ee7b80cb813542594d4235c4a0b8695435d5ecf23dd3580bc7515ae1b6180d-primary.xml.zst - Nix (92%): ```sh nix profile install nixpkgs#snakemake ``` Evidence: nixpkgs package indexes: pkgs/by-name/sn/snakemake/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1 ## Package Facts - **Package key:** brew:snakemake - **Package manager:** Homebrew - **Package manager URL:** - **Version:** 9.22.0 - **Source summary:** Pythonic workflow system - **Homepage:** - **Repository:** - **Upstream docs:** - **License:** MIT - **Source archive:** - **Last updated:** 2026-06-02T20:01:43Z - **Generated:** 2026-06-10T07:18:26+00:00 ## Executables - snakemake (cli) - snakemake (alias) ## Dependencies - cbc - certifi - libyaml - pydantic - python@3.14 - rpds-py ## Build Dependencies - rust ## Install Behavior - Post-install hook: not defined - Bottle: available on arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux ## Freshness - Page generated: 2026-06-10 - Package-manager version: 9.22.0 - Package-manager updated: 2026-06-02 - Local data status: ok - Upstream repository: https://snakemake.readthedocs.io/ - info: Release/tag comparison is only available for GitHub repositories. ## Notes de sécurité no executable entrypoint in the package index. - **Geiger risk:** green / low - no executable entrypoint in the package index ## Source Database Details - **Source Database:** Homebrew formula API - **Tap:** homebrew/core - **Full Name:** snakemake - **Version Scheme:** 0 - **Revision:** 0 - **Head Version:** HEAD - **Bottle Stable Root URL:** - **Deprecated:** no - **Disabled:** no - **Keg Only:** no - **URL Keys:** head, stable ## Other Package-Manager Records - Debian apt - snakemake - 7.32.4-7: normalized package name match | Debian stable package indexes: snakemake from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | pythonic workflow management system | https://snakemake.readthedocs.io/ - Debian apt - snakemake-doc - 7.32.4-7: normalized package name match | Debian stable package indexes: snakemake-doc from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | documentation for pythonic workflow management system | https://snakemake.readthedocs.io/ - Nix - snakemake: normalized package name match | nixpkgs package indexes: pkgs/by-name/sn/snakemake/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1 - Ubuntu apt - snakemake - 7.32.4-2: normalized package name match | Ubuntu 24.04 LTS package indexes: snakemake from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | pythonic workflow management system | https://snakemake.readthedocs.io/ - Ubuntu apt - snakemake-doc - 7.32.4-2: normalized package name match | Ubuntu 24.04 LTS package indexes: snakemake-doc from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | documentation for pythonic workflow management system | https://snakemake.readthedocs.io/ - dnf - snakemake - 9.21.0-2.fc45: normalized package name match | Fedora Rawhide package metadata: snakemake from https://dl.fedoraproject.org/pub/fedora/linux/development/rawhide/Everything/x86_64/os/repodata/13ee7b80cb813542594d4235c4a0b8695435d5ecf23dd3580bc7515ae1b6180d-primary.xml.zst | Workflow management system to create reproducible and scalable data analyses | https://snakemake.readthedocs.io/en/stable/index.html - dnf - snakemake+reports - 9.21.0-2.fc45: normalized package name match | Fedora Rawhide package metadata: snakemake+reports from https://dl.fedoraproject.org/pub/fedora/linux/development/rawhide/Everything/x86_64/os/repodata/13ee7b80cb813542594d4235c4a0b8695435d5ecf23dd3580bc7515ae1b6180d-primary.xml.zst | Metapackage for snakemake: reports extras | https://snakemake.readthedocs.io/en/stable/index.html ## Related Links - [Terminal utility packages](https://www.automicvault.com/fr/pkg/terminal-utilities/) - Matched terminal and command-line workflow metadata. - [Language runtime packages](https://www.automicvault.com/fr/pkg/language-runtime-packages/) - Matched language runtime, compiler, or interpreter metadata. - [Networking and protocol packages](https://www.automicvault.com/fr/pkg/networking-protocol-tools/) - Matched network, protocol, or remote-service metadata. - [Database and data packages](https://www.automicvault.com/fr/pkg/database-data-tools/) - Matched database, SQL, migration, or data-store metadata. - [python@3.14](https://www.automicvault.com/fr/pkg/brew/python-3-14/) - Runtime dependency declared by Homebrew. - [cbc](https://www.automicvault.com/fr/pkg/brew/cbc/) - Runtime dependency declared by Homebrew. - [rust](https://www.automicvault.com/fr/pkg/brew/rust/) - Build dependency declared by Homebrew. - [root](https://www.automicvault.com/fr/pkg/brew/root/) - Shares av.db curated category or tags: cli, data-analysis, science. - [nextflow](https://www.automicvault.com/fr/pkg/brew/nextflow/) - Shares av.db curated category or tags: cli, reproducibility, science, workflow. - [healpix](https://www.automicvault.com/fr/pkg/brew/healpix/) - Shares av.db curated category or tags: cli, data-analysis, science. - [gnuastro](https://www.automicvault.com/fr/pkg/brew/gnuastro/) - Shares av.db curated category or tags: cli, data-analysis, science. - [qsoas](https://www.automicvault.com/fr/pkg/brew/qsoas/) - Shares av.db curated category or tags: cli, data-analysis, science. - [xlispstat](https://www.automicvault.com/fr/pkg/brew/xlispstat/) - Shares av.db curated category or tags: cli, data-analysis, science. - [gwyddion](https://www.automicvault.com/fr/pkg/brew/gwyddion/) - Shares av.db curated category or tags: cli, data-analysis, science. - [cromwell](https://www.automicvault.com/fr/pkg/brew/cromwell/) - Shares av.db curated category or tags: bioinformatics, cli, science, workflow-management. - [jupyterlab](https://www.automicvault.com/fr/pkg/brew/jupyterlab/) - Both packages touch the same language runtime or ecosystem. Shared terms: certifi, cli, data, libyaml, python. - [cutadapt](https://www.automicvault.com/fr/pkg/brew/cutadapt/) - Both packages touch the same language runtime or ecosystem. Shared terms: bioinformatics, cli, python, python-3-14, science. ## Sources - Nucleus package database - Geiger risk classifier - package-page enrichment - package version freshness - av.db category and tag curation - package relationship graph - external package-manager database matches - cross-ecosystem install command graph