# Installer htslib

Consultez les chemins d'installation, exécutables, métadonnées et notes de sécurité de htslib pour les workflows d'agents IA.

## installation

```sh
sudo av install brew:htslib
```

Commandes d'installation supplémentaires:

### macOS

- Homebrew (100%):

```sh
brew install htslib
```

  Preuve: local Homebrew formula metadata

- MacPorts (94%):

```sh
sudo port install htslib
```

  Preuve: MacPorts ports tree: science/htslib/Portfile from https://api.github.com/repos/macports/macports-ports/git/trees/master?recursive=1

### Linux

- dnf (92%):

```sh
sudo dnf install htslib
```

  Preuve: Fedora Rawhide package metadata: htslib from https://dl.fedoraproject.org/pub/fedora/linux/development/rawhide/Everything/x86_64/os/repodata/13ee7b80cb813542594d4235c4a0b8695435d5ecf23dd3580bc7515ae1b6180d-primary.xml.zst

- Nix (92%):

```sh
nix profile install nixpkgs#htslib
```

  Preuve: nixpkgs package indexes: pkgs/by-name/ht/htslib/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1

- zypper (92%):

```sh
sudo zypper install bgzip
```

  Preuve: openSUSE Tumbleweed package metadata: bgzip from https://download.opensuse.org/tumbleweed/repo/oss/repodata/155b97171d05e27afd950b6fe0d55513ff38f4597110664535bceedc680bbe6fd459f0733718dcc21dcf0efc7c8250fd1390c73d4790b42e62fb2c16a87242e5-primary.xml.zst

- Debian apt (92%):

```sh
sudo apt install tabix
```

  Preuve: Debian stable package indexes: tabix from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz

## Faits du paquet

- **Clé du paquet:** brew:htslib
- **Gestionnaire de paquets:** Homebrew
- **Page du gestionnaire de paquets:** <https://formulae.brew.sh/formula/htslib>
- **Version:** 1.23.1
- **Résumé source:** C library for high-throughput sequencing data formats
- **Page d'accueil:** <https://www.htslib.org/>
- **Dépôt:** <https://github.com/samtools/htslib>
- **Docs amont:** <https://www.htslib.org/>
- **Licence:** MIT AND BSD-3-Clause
- **Archive source:** <https://github.com/samtools/htslib/releases/download/1.23.1/htslib-1.23.1.tar.bz2>
- **Mis à jour:** 2026-03-20T18:54:16Z
- **Source générée:** 2026-05-26T22:45:13+00:00

## exécutables

- annot-tsv (cli)
- bgzip (cli)
- htsfile (cli)
- ref-cache (cli)
- tabix (cli)
- annot-tsv (alias)
- bgzip (alias)
- htsfile (alias)
- ref-cache (alias)
- tabix (alias)

## Dépendances

- libdeflate
- xz

## Bibliothèques fournies par macOS

- bzip2
- curl

## Comportement d'installation

- hook post-installation: non défini
- Bouteille: disponible sur arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux

## fraîcheur

- page générée: 2026-05-26
- version du gestionnaire: 1.23.1
- gestionnaire mis à jour: 2026-03-20
- données locales: ok
- dépôt amont: https://github.com/samtools/htslib
- info: No cached GitHub release or tag data was available.

## Notes de sécurité

library-like package without higher-risk signals.

- **Risque Geiger:** green / low
- library-like package without higher-risk signals

## Liens liés

- [xz](https://www.automicvault.com/pkg/brew/xz/) - Runtime dependency declared by Homebrew.
- [libdeflate](https://www.automicvault.com/pkg/brew/libdeflate/) - Runtime dependency declared by Homebrew.
- [samtools](https://www.automicvault.com/pkg/brew/samtools/) - Popular package that depends on this formula.
- [bcftools](https://www.automicvault.com/pkg/brew/bcftools/) - Popular package that depends on this formula.
- [vcftools](https://www.automicvault.com/pkg/brew/vcftools/) - Popular package that depends on this formula.
- [augustus](https://www.automicvault.com/pkg/brew/augustus/) - Popular package that depends on this formula.
- [tabixpp](https://www.automicvault.com/pkg/brew/tabixpp/) - Popular package that depends on this formula.
- [freebayes](https://www.automicvault.com/pkg/brew/freebayes/) - Popular package that depends on this formula.
- [stringtie](https://www.automicvault.com/pkg/brew/stringtie/) - Popular package that depends on this formula.
- [jellyfish](https://www.automicvault.com/pkg/brew/jellyfish/) - Popular package that depends on this formula.

## Sources

- Nucleus package database
- Geiger risk classifier
- package-page enrichment
- package version freshness
- package relationship graph
- cross-ecosystem install command graph