# Installer diamond avec Homebrew, Nix

Consultez les chemins d'installation, exécutables, métadonnées et notes de sécurité de diamond pour les workflows d'agents IA.

## installation

```sh
sudo av install brew:diamond
```

Commandes d'installation supplémentaires:

### macOS

- Homebrew (100%):

```sh
brew install diamond
```

  Preuve: local Homebrew formula metadata

### Linux

- Nix (92%):

```sh
nix profile install nixpkgs#diamond
```

  Preuve: nixpkgs package indexes: pkgs/by-name/di/diamond/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1

## Faits du paquet

- **Clé du paquet:** brew:diamond
- **Gestionnaire de paquets:** Homebrew
- **Page du gestionnaire de paquets:** <https://formulae.brew.sh/formula/diamond>
- **Version:** 2.2.3
- **Résumé source:** Accelerated BLAST compatible local sequence aligner
- **Page d'accueil:** <https://github.com/bbuchfink/diamond>
- **Dépôt:** <https://github.com/bbuchfink/diamond>
- **Docs amont:** <https://bbuchfink.github.io/diamond>
- **Licence:** GPL-3.0-or-later
- **Archive source:** <https://github.com/bbuchfink/diamond/archive/refs/tags/v2.2.3.tar.gz>
- **Dernière mise à jour:** 2026-07-07T12:34:31Z
- **Généré:** 2026-07-08T18:08:21+00:00

## exécutables

- diamond (cli)
- diamond (alias)

## Dépendances de compilation

- cmake

## Bibliothèques fournies par macOS

- sqlite

## Comportement d'installation

- hook post-installation: non défini
- Bouteille: disponible sur arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux

## Version et fraîcheur

- page générée: 2026-07-08
- version du gestionnaire: 2.2.3
- gestionnaire mis à jour: 2026-07-07
- données locales: OK
- dépôt amont: https://github.com/bbuchfink/diamond
- dernière version détectée: v2.2.3 (à jour)
## Historique du projet et usages

DIAMOND is a high-performance sequence aligner for protein and translated DNA searches, positioned as a BLAST-compatible tool for large biological datasets.

### Historique du projet

The README says the initial version was developed by Benjamin J. Buchfink at the Huson lab, University of Tuebingen, from 2013 to 2015. Later development continued independently, with support from an EXIST grant in 2018-2019 and the Max Planck Institute for Biology Tuebingen from 2019 to 2024.

### Historique d'adoption

DIAMOND's adoption is tied to its promise of much faster BLAST-like protein and translated DNA alignment. The README highlights 100x to 10,000x BLAST speed, low resource requirements, downloads from GitHub releases, Bioconda availability, Galaxy integration, and citation badges.

### Modes d'utilisation

Package users install DIAMOND when they need command-line database creation, protein search, translated DNA search, sequence clustering, taxonomic classification, or BLAST-style tabular, pairwise, and XML outputs.

### Pourquoi les passionnés de paquets s'y intéressent

DIAMOND is significant because it is a research-grade bioinformatics workhorse that also behaves like a normal packaged CLI. That combination makes it common in reproducible pipelines, containers, Conda environments, Homebrew installs, and HPC workflows.

### Chronologie

- 2013-2015: Initial version developed at the Huson lab, University of Tuebingen.
- 2015: Original DIAMOND publication cited in the README.
- 2021: Sensitive protein alignments at tree-of-life scale publication cited in the README.
- 2026: v2.2.2 release published on GitHub.

### Related projects

- The README frames DIAMOND as BLAST-compatible and links it to Bioconda and the European Galaxy server for workflow use.

### Sources

- <https://github.com/bbuchfink/diamond>
- <https://raw.githubusercontent.com/bbuchfink/diamond/master/README.md>
- <https://api.github.com/repos/bbuchfink/diamond>
- <https://github.com/bbuchfink/diamond/releases/tag/v2.2.2>


## Notes de sécurité

Aucun manifest local de gestion des secrets correspondant n'a été trouvé pour diamond. Les métadonnées de paquet Nucleus restent publiées ici afin que la couverture future dispose d'une URL stable.


## Détails de la base source

- **Source Database:** Homebrew formula API
- **Tap:** homebrew/core
- **Full Name:** diamond
- **Version Scheme:** 0
- **Revision:** 0
- **Bottle Stable Root URL:** <https://ghcr.io/v2/homebrew/core>
- **Deprecated:** no
- **Disabled:** no
- **Keg Only:** no
- **URL Keys:** stable

## Autres enregistrements de gestionnaires de paquets

- Nix - diamond: normalized package name match | nixpkgs package indexes: pkgs/by-name/di/diamond/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1


## Liens liés

- [Source-control packages](https://www.automicvault.com/fr/pkg/source-control-tools/) - Belongs to a source-control command family.
- [Terminal utility packages](https://www.automicvault.com/fr/pkg/terminal-utilities/) - Matched terminal and command-line workflow metadata.
- [Text processing packages](https://www.automicvault.com/fr/pkg/text-processing-tools/) - Matched text, document, or structured-data processing metadata.
- [Networking and protocol packages](https://www.automicvault.com/fr/pkg/networking-protocol-tools/) - Matched network, protocol, or remote-service metadata.
- [cmake](https://www.automicvault.com/fr/pkg/brew/cmake/) - Build dependency declared by Homebrew.
- [proteinortho](https://www.automicvault.com/fr/pkg/brew/proteinortho/) - Popular package that depends on this formula.
- [abpoa](https://www.automicvault.com/fr/pkg/brew/abpoa/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-alignment.
- [mafft](https://www.automicvault.com/fr/pkg/brew/mafft/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-alignment.
- [minimap2](https://www.automicvault.com/fr/pkg/brew/minimap2/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-alignment.
- [blast](https://www.automicvault.com/fr/pkg/brew/blast/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-alignment.
- [bwa](https://www.automicvault.com/fr/pkg/brew/bwa/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-alignment.
- [hmmer](https://www.automicvault.com/fr/pkg/brew/hmmer/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-alignment.
- [lastz](https://www.automicvault.com/fr/pkg/brew/lastz/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-alignment.
- [mummer](https://www.automicvault.com/fr/pkg/brew/mummer/) - Shares av.db curated category or tags: bioinformatics, cli, science, sequence-alignment.

## Combined YAML source

View the package source record on GitHub. [combined/diamond.yml](https://github.com/automic-vault/db/blob/main/combined/diamond.yml)


## Sources

- Nucleus package database
- Geiger risk classifier
- package-page enrichment
- curated package history
- package version freshness
- av.db category and tag curation
- package relationship graph
- external package-manager database matches
- cross-ecosystem install command graph