# Installer bcftools

Consultez les chemins d'installation, exécutables, métadonnées et notes de sécurité de bcftools pour les workflows d'agents IA.

## installation

```sh
sudo av install brew:bcftools
```

Commandes d'installation supplémentaires:

### macOS

- Homebrew (100%):

```sh
brew install bcftools
```

  Preuve: local Homebrew formula metadata

- MacPorts (94%):

```sh
sudo port install bcftools
```

  Preuve: MacPorts ports tree: science/bcftools/Portfile from https://api.github.com/repos/macports/macports-ports/git/trees/master?recursive=1

### Linux

- Debian apt (92%):

```sh
sudo apt install bcftools
```

  Preuve: Debian stable package indexes: bcftools from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz

- dnf (92%):

```sh
sudo dnf install bcftools
```

  Preuve: Fedora Rawhide package metadata: bcftools from https://dl.fedoraproject.org/pub/fedora/linux/development/rawhide/Everything/x86_64/os/repodata/13ee7b80cb813542594d4235c4a0b8695435d5ecf23dd3580bc7515ae1b6180d-primary.xml.zst

- Nix (92%):

```sh
nix profile install nixpkgs#bcftools
```

  Preuve: nixpkgs package indexes: pkgs/by-name/bc/bcftools/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1

- zypper (92%):

```sh
sudo zypper install bcftools
```

  Preuve: openSUSE Tumbleweed package metadata: bcftools from https://download.opensuse.org/tumbleweed/repo/oss/repodata/155b97171d05e27afd950b6fe0d55513ff38f4597110664535bceedc680bbe6fd459f0733718dcc21dcf0efc7c8250fd1390c73d4790b42e62fb2c16a87242e5-primary.xml.zst

## Faits du paquet

- **Clé du paquet:** brew:bcftools
- **Gestionnaire de paquets:** Homebrew
- **Page du gestionnaire de paquets:** <https://formulae.brew.sh/formula/bcftools>
- **Version:** 1.23.1
- **Résumé source:** Tools for BCF/VCF files and variant calling from samtools
- **Page d'accueil:** <https://www.htslib.org/>
- **Dépôt:** <https://github.com/samtools/bcftools>
- **Docs amont:** <https://www.htslib.org/>
- **Licence:** GPL-3.0-or-later
- **Archive source:** <https://github.com/samtools/bcftools/releases/download/1.23.1/bcftools-1.23.1.tar.bz2>
- **Mis à jour:** 2026-03-18T19:18:16Z
- **Source générée:** 2026-05-26T22:45:13+00:00

## exécutables

- bcftools (cli)
- color-chrs.pl (cli)
- gff2gff (cli)
- gff2gff.py (cli)
- guess-ploidy.py (cli)
- plot-roh.py (cli)
- plot-vcfstats (cli)
- roh-viz (cli)
- run-roh.pl (cli)
- vcfutils.pl (cli)
- vrfs-variances (cli)
- bcftools (alias)
- color-chrs.pl (alias)
- gff2gff (alias)
- gff2gff.py (alias)
- guess-ploidy.py (alias)
- plot-roh.py (alias)
- plot-vcfstats (alias)
- roh-viz (alias)
- run-roh.pl (alias)
- vcfutils.pl (alias)
- vrfs-variances (alias)

## Dépendances

- gsl
- htslib

## Comportement d'installation

- hook post-installation: non défini
- Bouteille: disponible sur arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux

## fraîcheur

- page générée: 2026-05-26
- version du gestionnaire: 1.23.1
- gestionnaire mis à jour: 2026-03-18
- données locales: ok
- dépôt amont: https://github.com/samtools/bcftools
- info: No cached GitHub release or tag data was available.

## Notes de sécurité

narrow executable package without higher-risk signals.

- **Risque Geiger:** green / low
- narrow executable package without higher-risk signals

## Liens liés

- [gsl](https://www.automicvault.com/pkg/brew/gsl/) - Runtime dependency declared by Homebrew.
- [htslib](https://www.automicvault.com/pkg/brew/htslib/) - Runtime dependency declared by Homebrew.
- [samtools](https://www.automicvault.com/pkg/brew/samtools/) - Shares the same upstream homepage.

## Sources

- Nucleus package database
- Geiger risk classifier
- package-page enrichment
- package version freshness
- package relationship graph
- cross-ecosystem install command graph