# paml mit Homebrew, apt, Nix installieren Prüfe Installationswege, Executables, Metadaten und Sicherheitshinweise für paml in AI-Agent-Workflows. ## Installation ```sh sudo av install brew:paml ``` Weitere Installationsbefehle: ### macOS - Homebrew (100%): ```sh brew install paml ``` Evidenz: local Homebrew formula metadata ### Linux - Debian apt (92%): ```sh sudo apt install paml ``` Evidenz: Debian stable package indexes: paml from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz - Nix (92%): ```sh nix profile install nixpkgs#paml ``` Evidenz: nixpkgs package indexes: pkgs/by-name/pa/paml/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1 ## Paketfakten - **Paketschlüssel:** brew:paml - **Paketmanager:** Homebrew - **Paketmanager-Seite:** - **Version:** 4.10.10 - **Quellzusammenfassung:** Phylogenetic analyses of DNA or protein sequences using maximum likelihood - **Homepage:** - **Repository:** - **Upstream-Dokumentation:** - **Lizenz:** GPL-3.0-only - **Quellarchiv:** - **Zuletzt aktualisiert:** 2026-05-03T17:51:16+02:00 - **Generiert:** 2026-07-08T18:08:21+00:00 ## Executables - baseml (cli) - basemlg (cli) - chi2 (cli) - codeml (cli) - evolver (cli) - infinitesites (cli) - mcmctree (cli) - pamp (cli) - yn00 (cli) - baseml (Alias) - basemlg (Alias) - chi2 (Alias) - codeml (Alias) - evolver (Alias) - infinitesites (Alias) - mcmctree (Alias) - pamp (Alias) - yn00 (Alias) ## Installationsverhalten - Post-install-Hook: nicht definiert - Bottle: verfügbar auf arm64_linux, arm64_sequoia, arm64_sonoma, arm64_tahoe, sonoma, x86_64_linux ## Version und Aktualität - Seite generiert: 2026-07-08 - Manager-Version: 4.10.10 - Manager aktualisiert: 2026-05-03 - lokale Daten: OK - Upstream-Repository: https://github.com/abacus-gene/paml - neueste erkannte Version: v4.10.10 (aktuell) ## Sicherheitshinweise narrow executable package without higher-risk signals. - **Geiger-Risiko:** grün / niedrig - narrow executable package without higher-risk signals ## Details aus der Quelldatenbank - **Source Database:** Homebrew formula API - **Tap:** homebrew/core - **Full Name:** paml - **Version Scheme:** 0 - **Revision:** 0 - **Bottle Stable Root URL:** - **Deprecated:** no - **Disabled:** no - **Keg Only:** no - **URL Keys:** stable ## Andere Paketmanager-Einträge - Debian apt - paml - 4.9j+dfsg-6: normalized package name match | Debian stable package indexes: paml from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Phylogenetic Analysis by Maximum Likelihood (PAML) | http://abacus.gene.ucl.ac.uk/software/paml.html - Debian apt - paml-doc - 4.9j+dfsg-6: normalized package name match | Debian stable package indexes: paml-doc from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Documentation for PAML | http://abacus.gene.ucl.ac.uk/software/paml.html - Nix - paml: normalized package name match | nixpkgs package indexes: pkgs/by-name/pa/paml/package.nix from https://api.github.com/repos/NixOS/nixpkgs/git/trees/master?recursive=1 - Ubuntu apt - paml - 4.9j+dfsg-4: normalized package name match | Ubuntu 24.04 LTS package indexes: paml from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | Phylogenetic Analysis by Maximum Likelihood (PAML) | http://abacus.gene.ucl.ac.uk/software/paml.html - Ubuntu apt - paml-doc - 4.9j+dfsg-4: normalized package name match | Ubuntu 24.04 LTS package indexes: paml-doc from https://archive.ubuntu.com/ubuntu/dists/noble/universe/binary-amd64/Packages.gz | Documentation for PAML | http://abacus.gene.ucl.ac.uk/software/paml.html - Debian apt - evolver - 2.70+ds-8: installed executable or alias match | Debian stable package indexes: evolver from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Surface Evolver | https://facstaff.susqu.edu/brakke/evolver/evolver.html - Debian apt - evolver-doc - 2.70+ds-8: installed executable or alias match | Debian stable package indexes: evolver-doc from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Surface Evolver - doc | https://facstaff.susqu.edu/brakke/evolver/evolver.html - Debian apt - evolver-nox - 2.70+ds-8+b2: installed executable or alias match | Debian stable package indexes: evolver-nox from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Surface Evolver - with no X support | https://facstaff.susqu.edu/brakke/evolver/evolver.html - Debian apt - evolver-ogl - 2.70+ds-8+b2: installed executable or alias match | Debian stable package indexes: evolver-ogl from https://deb.debian.org/debian/dists/stable/main/binary-amd64/Packages.xz | Surface Evolver - with OpenGL display | https://facstaff.susqu.edu/brakke/evolver/evolver.html ## Verwandte Links - [Source-control packages](https://www.automicvault.com/de/pkg/source-control-tools/) - Belongs to a source-control command family. - [Terminal utility packages](https://www.automicvault.com/de/pkg/terminal-utilities/) - Matched terminal and command-line workflow metadata. - [Networking and protocol packages](https://www.automicvault.com/de/pkg/networking-protocol-tools/) - Matched network, protocol, or remote-service metadata. - [Scientific computing packages](https://www.automicvault.com/de/pkg/scientific-computing-tools/) - Matched scientific computing metadata. - [fastme](https://www.automicvault.com/de/pkg/brew/fastme/) - Shares av.db curated category or tags: bioinformatics, cli, phylogenetics, science. - [trimal](https://www.automicvault.com/de/pkg/brew/trimal/) - Shares av.db curated category or tags: bioinformatics, cli, phylogenetics, science. - [veryfasttree](https://www.automicvault.com/de/pkg/brew/veryfasttree/) - Shares av.db curated category or tags: bioinformatics, cli, phylogenetics, science. - [iqtree3](https://www.automicvault.com/de/pkg/brew/iqtree3/) - Shares av.db curated category or tags: bioinformatics, cli, maximum-likelihood, phylogenetics, science. - [raxml-ng](https://www.automicvault.com/de/pkg/brew/raxml-ng/) - Shares av.db curated category or tags: bioinformatics, cli, maximum-likelihood, phylogenetics, science. - [bbtools](https://www.automicvault.com/de/pkg/brew/bbtools/) - Shares av.db curated category or tags: bioinformatics, cli, dna, science. - [breseq](https://www.automicvault.com/de/pkg/brew/breseq/) - Shares av.db curated category or tags: bioinformatics, cli, dna, science. - [bwa](https://www.automicvault.com/de/pkg/brew/bwa/) - Shares av.db curated category or tags: bioinformatics, cli, dna, science. - [kalign](https://www.automicvault.com/de/pkg/brew/kalign/) - Local package facts share a topical domain. Shared terms: bioinformatics, cli, dna, protein, science. - [mummer](https://www.automicvault.com/de/pkg/brew/mummer/) - Local package facts share a topical domain. Shared terms: bioinformatics, cli, dna, protein, science. ## Combined YAML source View the package source record on GitHub. [combined/paml.yml](https://github.com/automic-vault/db/blob/main/combined/paml.yml) ## Quellen - Nucleus package database - Geiger risk classifier - package-page enrichment - package version freshness - av.db category and tag curation - package relationship graph - external package-manager database matches - cross-ecosystem install command graph